Genome completeness and contamination, and taxonomy were estimated unsing CheckM2.
Quality score is calculated as: Completeness - 5 x Contamination.
For all the information see the file Binning/vamb/bin_info.tsv and Binning/vamb/bins2species.tsv
Bins | Species | |
---|---|---|
All | 270 | 92 |
Quality score >50 | 270 | 92 |
Good quality | 104 | 52 |
Quality score >90 | 85 | 45 |
"Good quality" refers to the standard of Completeness > 90% and Contamination < 5%. Also called high-quality or near-complete. But t-RNA/r-RNA presence is not evaluated. It is less stingent than Quality Score > 90.