Step | Output |
---|---|
raw | The input reads specified in the configuration |
deduplicated | Counts after (optional) deduplication step |
filtered | Low quality reads have been removed |
clean | Contaminants removed |
QC | Passing reads -- for metagenomic samples, 16S reads are returned to sequence pool |
Paired end reads that lost their mate during filtering.
An internet connection is required to vizualize the interactive figures.
- T1:
- read_counts.tsv